DGMP – dGMP

Name
WID DGMP View in model
Name dGMP View in model
Traditional name [5-(2-amino-6-oxo-1H-purin-9-yl)-3-hydroxyoxolan-2-yl]methyl phosphate
IUPAC name [5-(2-amino-6-oxo-6,9-dihydro-1H-purin-9-yl)-3-hydroxyoxolan-2-yl]methyl phosphate
Cross references ChEBI: 16192, PubChem: 3653, CAS: 902-04-5, ThreeDMET: B01228, KNApSAcK: C00019356, ... 3 more
 
Classification
Type deoxyribonucleotide_monophosphate View in model
 
Structure
Empirical formula (pH 7.5) H12C10N5O7P1
SMILES (pH 7.5) C(OP(=O)([O-])[O-])C1(OC(CC(O)1)N3(C=NC2(C(=O)NC(N)=NC=23)))
Charge (pH 7.5) -2
Is hydrophobic False View in model
Molecular weight (Da) 345.20 View in model
van der Waals volume 
(pH 7.5; Å3 molecule‑1)
255.14
ΔfG'o (pH 7.5, 25C, I = 0; kJ mol‑1) -530.90
pI 1.47
logP -2.72
logD (pH 7.5) -5.28
 
Concentrations
Biomass composition (SP4 media, 
5% CO2, 37C; mmol gDCW‑1)
  • 0.0863136 [c]

View in model
 
Function
Reaction participant View in model
 
Metadata
Created 2012-10-01 15:06:54
Last updated 2012-10-01 15:12:02