CSN_GLYC – cytosine glycol

Name
WID CSN_GLYC View in model
Name cytosine glycol View in model
Traditional name cytosine glycol
IUPAC name 4-amino-5,6-dihydroxy-1,2,5,6-tetrahydropyrimidin-2-one
Cross references CAS: 13484-98-5, ChEBI: 29127, PubChem: 8146715
 
Classification
Type modified_nucleobase View in model
 
Structure
Empirical formula (pH 7.5) H7C4N3O3
SMILES (pH 7.5) N1C(C(C(=NC1=O)N)O)O
Charge (pH 7.5) 0
Is hydrophobic False View in model
Molecular weight (Da) 145.12 View in model
van der Waals volume 
(pH 7.5; Å3 molecule‑1)
114.96
pI 6.32
logP -2.67
logD (pH 7.5) -2.68
 
Function
Reaction participant DNA radiation (gamma-ray) induced base oxidation (cytosine ==> cytosine glycol; hydroxyl radical)
CSN[c] + gamma_radiation[e] + (2) hydroxyl_radical[c] ⇒ CSN_GLYC[c]
View in model
 
Metadata
Created 2012-10-01 15:06:52
Last updated 2012-10-01 15:11:59